Cancer Research Collection

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“This repository contains morden baysian statistics and deep learning based research articles , software for survival analysis”

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“A deep learning approach to predicting breast tumor proliferation scores for the TUPAC16 challenge”

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🔥Fire

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“PhysiCell: Scientist end users should use latest release! Developers please fork the development branch and submit PRs to the dev branch. Thanks!”

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🔮Psychic

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“AI-based pathology predicts origins for cancers of unknown primary - Nature”

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“🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R https://shixiangwang.github.io/sigminer/reference/index.html”

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🔥Fire

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“Chaste - Cancer Heart And Soft Tissue Environment - main public repository. ”

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“DeepSpot: Deep learning model for predicting spatial transcriptomics from H&E histopathology images. Supports spot-level (Visium) and single-cell (Xenium) resolution.”

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⚡Electric

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“Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay”

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“An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer. ”

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“Cancer Predisposition Sequencing Reporter (CPSR)”