Pseudotime Collection

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“iCellR is an interactive R package designed to facilitate the analysis and visualization of high-throughput single-cell sequencing data. It supports a variety of single-cell technologies, including scRNA-seq, scVDJ-seq, scATAC-seq, CITE-Seq, and Spatial Transcriptomics (ST).”

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🔮Psychic

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“Toolkit for highly memory efficient analysis of single-cell RNA-Seq, scATAC-Seq and CITE-Seq data. Analyze atlas scale datasets with millions of cells on laptop.”

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“Finding surprising needles (=genes) in haystacks (=single cell transcriptome data).”

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🔮Psychic

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“A deep learning architecture for robust inference and accurate prediction of cellular dynamics”

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🔮Psychic

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“a scalable python suite for tree inference and advanced pseudotime analysis from scRNAseq data.”