Singularity Collection

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📦Normal

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“A DSL for data-driven computational pipelines”

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🌊Water

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“Singularity has been renamed to Apptainer as part of us moving the project to the Linux Foundation. This repo has been persisted as a snapshot right before the changes.”

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🌊Water

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“Apptainer: Application containers for Linux”

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🔮Psychic

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“Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Schake, Bolz, et al. (2025), https://doi.org/10.1093/nar/gkaf361”

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🔮Psychic

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“HPC Container Maker”

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🔥Fire

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“Molecular dynamics and Monte Carlo soft matter simulation on GPUs.”

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🔮Psychic

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“Container-native task automation engine.”

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💻Normal

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“A docker image for converting docker images to singularity images.”

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🔮Psychic

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“Simplify HPC and Batch workloads on Azure”

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📦Normal

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“:package: :whale: Dockerfiles and documentation on tools for public health bioinformatics”

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🔮Psychic

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“Docker/Singularity image for Ubuntu with X11 and VNC”

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🔮Psychic

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“Local filesystem registry for containers (intended for HPC) using Lmod or Environment Modules. Works for users and admins.”

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📦Normal

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“Tutorial for using Singularity containers”

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🌊Water

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“Singularity implementation of k8s operator for interacting with SLURM.”

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🌊Water

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“The Singularity implementation of the Kubernetes Container Runtime Interface”

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⚡Electric

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“HIPAA & GDPR compliant ready parse-server with postgres/mongo, parse-hipaa-dashboard. Compatible with ParseCareKit”

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📦Normal

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“ Nextflow pipeline for analysis of direct RNA Nanopore reads”

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⚡Electric

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“server for storage and management of singularity images”