Wsi Collection
Repositories tagged with "wsi"
RARE
TCG-style cards with ATK/DEF/SPD stats
Repositories tagged with "wsi"
deepslide
BMIRDS
โCode for the Nature Scientific Reports paper "Pathologist-level classification of histologic patterns on resected lung adenocarcinoma slides with deep neural networks." A sliding window framework for classification of high resolution whole-slide images, often microscopy or histopathology images.โ
histolab
histolab
โLibrary for Digital Pathology Image Processingโ
bioformats
ome
โBio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy Environment. Bio-Formats is released under the GNU General Public License (GPL); commercial licenses are available from Glencoe Software. โ
WSIStreamer
PABannier
โA tile server for WSI stored in S3-compatible object storage.โ
Patch-GCN
mahmoodlab
โContext-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021โ
bluelight
cylab-tw
โa browser-based DICOM viewerโ
tcga_segmentation
MarvinLer
โWhole Slide Image segmentation with weakly supervised multiple instance learning on TCGA | MICCAI2020 https://arxiv.org/abs/2004.05024โ
pathology-whole-slide-data
DIAGNijmegen
โA package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.โ
WSI-finetuning
invoker-LL
โThis is the official repository for our CVPR 2023 paper 'Task-Specific Fine-Tuning via Variational Information Bottleneck for Weakly-Supervised Pathology Whole Slide Image Classification'.โ
wsi-to-dicom-converter
GoogleCloudPlatform
โConversion tool/library for converting whole slide images to DICOMโ
Wsi-Caption
cpystan
โOfficial Inplementation of ใWsiCaption: Multiple Instance Generation of Pathology Reports for Gigapixel Whole Slide Imagesใ(MICCAI 2024 Oral/ Best Paper Candidate)โ
DigiPathAI
haranrk
โTool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlayโ
PyHIST
manuel-munoz-aguirre
โA pipeline to segment tissue from the background in histological imagesโ
patho-sam
computational-cell-analytics
โSegment Anything for Histopathologyโ
mil4wsi
aimagelab
โDAS-MIL: Distilling Across Scales for MILClassification of Histological WSIsโ
wsi-preprocessing
lucasrla
โSimple library for preprocessing histopathological whole-slide images (WSI) into tiles (a.k.a. patches) towards deep learningโ
raccoon
cylab-tw
โRaccoon is a NoSQL-based medical image archive for managing the DICOM images. โ